metaCRT statistics

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Citations per year

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Tool usage distribution map

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Associated diseases

Associated diseases

metaCRT specifications

Information


Unique identifier OMICS_09629
Name metaCRT
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

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metaCRT in publication

PMCID: 5648520
PMID: 29075368
DOI: 10.1186/s40793-017-0274-y

[…] for cog functional annotation, signal peptides prediction and transmembrane helices prediction, respectively. 5202 of the predicted amino acid sequences were annotated with 13,030 pfam ids. finally, metacrt [] was used to predict crispr loci and the resulting crispr-spacers were submitted to the crisprtarget server [] for the identification of putatively associated bacteriophage sequences., […]


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metaCRT institution(s)
School of Informatics and Computing, Indiana University, Bloomington, IN, USA; Center for Genomics and Bioinformatics, Indiana University, Bloomington, IN, USA; Department of Biology, Indiana University, Bloomington, IN, USA

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