MetaGen specifications


Unique identifier OMICS_22084
Name MetaGen
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++, R, Shell (Bash)
License BSD 2-clause “Simplified” License
Computer skills Advanced
Version 1.1.0
Stability Stable
Requirements Ray Assembler or MegaHIT Assembler, Bowtie2, Samtools, Repp, MASS, mixtools, doParallel, foreach, seqinr, getopt
Source code URL
Maintained Yes



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  • person_outline Wenxuan Zhong <>

Publication for MetaGen

MetaGen institution(s)
Department of Statistics, University of Georgia, Athens, GA, USA; Department of Statistics, Harvard University, Cambridge, MA, USA; Center for Statistical Science & Department of Industry Entering, Beijing, China
MetaGen funding source(s)
Supported in part by the National Institutes of Health (grant R01 GM113242-01); and the National Science Foundation (grants DMS-1440038 and DMS-1440037).

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