METAGENassist specifications

Unique identifier:
OMICS_07815
Restrictions to use:
None
Output format:
Upon completion, METAGENassist generates a variety of well-annotated tables and colorful, labeled graphs in an anti-aliased PNG format. PDF versions for some plots are also available. The processed data and images are available for download.
Stability:
Stable
Wikipedia:
https://en.wikipedia.org/wiki/METAGENassist
Interface:
Web user interface
Input format:
Users upload a taxonomic profile in one of several supported formats. A taxonomic profile file contains the names of microbial species (or other taxonomic classes) and their relative abundance in at least 2 samples. Accepted formats include CSV format, or data generated by mothur, QIIME, MG-RAST, MEGAN, and STAMP. Users will also benefit by uploading an optional file containing metadata for each sample (CSV format).
Computer skills:
Basic
Maintained:
Yes

METAGENassist support

Maintainer

  • David Wishart <>

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Publications

Institution(s)

Department of Computing Science, University of Alberta, Edmonton, AB, Canada

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