MetaGeniE specifications


Unique identifier OMICS_15202
Name MetaGeniE
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Stability Stable
Requirements BWA, STAMPY, SAMTOOLS, BLAT, PRINSEQ, PERL::Parallel Manager, Python, BEDTOOLS, BLAST
Maintained Yes



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  • person_outline Arun Rawat <>

Publication for MetaGeniE

MetaGeniE institution(s)
Pathogen Genomics Division, Translational Genomics Research Institute, Flagstaff, AZ, USA; Center for Microbial Genetics and Genomics, Northern Arizona University, Flagstaff, AZ, USA; Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, NH, USA
MetaGeniE funding source(s)
This work was supported by the Department of Defense-United States Army Medical Research & Materiel Command, Telemedicine & Advanced Technology Research Center, the United States Department of Homeland Security (DHS).

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