MetaGeniE specifications

Unique identifier:
OMICS_15202
Interface:
Command line interface
Operating system:
Unix/Linux
Computer skills:
Advanced
Requirements:
BWA, STAMPY, SAMTOOLS, BLAT, PRINSEQ, PERL::Parallel Manager, Python, BEDTOOLS, BLAST
Software type:
Pipeline/Workflow
Restrictions to use:
None
Programming languages:
Perl
Stability:
Stable
Maintained:
Yes

versioning

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MetaGeniE distribution

download

MetaGeniE support

Documentation

Maintainer

  • Arun Rawat <>

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Credits

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Publications

Institution(s)

Pathogen Genomics Division, Translational Genomics Research Institute, Flagstaff, AZ, USA; Center for Microbial Genetics and Genomics, Northern Arizona University, Flagstaff, AZ, USA; Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, NH, USA

Funding source(s)

This work was supported by the Department of Defense-United States Army Medical Research & Materiel Command, Telemedicine & Advanced Technology Research Center, the United States Department of Homeland Security (DHS).

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