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MEtaGenome ANalyzer MEGAN

Alternative name: MEGAN6

Allows to interactively explore and analyze, both taxonomically and functionally, large-scale microbiome sequencing data. MEGAN is a comprehensive microbiome analysis toolbox for metagenome, metatranscriptome, amplicon and from other sources data. User can perform taxonomic, functional or comparative analysis, map reads to reference sequences, reference-based multiple alignments and reference-guided assembly and integrate their own classifications.

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MEGAN forum

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MEGAN versioning

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MEGAN classification

MEGAN specifications

Software type:
Package/Module, Toolkit/Suite
Restrictions to use:
None
Programming languages:
Java
Computer skills:
Medium
Stability:
Stable
Source code URL:
https://github.com/danielhuson/megan-ce
Interface:
Graphical user interface
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU General Public License version 3.0
Version:
6.8.14
Maintained:
Yes

MEGAN support

Documentation

Maintainer

  • Daniel H. Huson <>

Additional information

A free edition (Community Edition) and a paid edition (Ultimate Edition) are both available.

Credits

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Publications

Institution(s)

Center for Bioinformatics, University of Tübingen, Tübingen, Germany

Link to literature

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