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Assembly software tools | Shotgun metagenomic sequencing data analysis

Most currently available assemblers were designed to assemble individual genomes or, in some cases, genomes of polyploid eukaryotes; however, they were not designed to assemble metagenomes comprising multiple species with nonuniform sequence coverage, and therefore, their performance with metagenomic data sets varies significantly.Source text: Kunin et al., 2008, Mavromatis et al., 2007.

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