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MetaGO specifications

Information


Unique identifier OMICS_32501
Name MetaGO
Interface Web user interface
Restrictions to use None
Input data A protein structure.
Input format PDB
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Yang Zhang

Publication for MetaGO

MetaGO citation

library_books

Identifying Group Specific Sequences for Microbial Communities Using Long k mer Sequence Signatures

2018
Front Microbiol
PMCID: 5943621
PMID: 29774017
DOI: 10.3389/fmicb.2018.00872

[…] genome (), therefore, we proposed a computational framework to identify group-specific sequences between two groups of metagenomic samples with long (≥30 bp) k-mers in this study. We call our method MetaGO: Group-specific oligonucleotide analysis for metagenomic samples. The main purpose of MetaGO is to discover group-specific sequence regions between control and case groups as disease-associated […]


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MetaGO institution(s)
Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, USA; Department of Biological Chemistry, University of Michigan, Ann Arbor, MI, USA
MetaGO funding source(s)
Supported in part by the NIGMS [GM083107, GM116960], and the National Science Foundation [DBI1564756].

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