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MetaGUN specifications
Information
| Unique identifier | OMICS_02615 |
|---|---|
| Name | MetaGUN |
| Software type | Package/Module |
| Interface | Command line interface |
| Restrictions to use | None |
| Operating system | Unix/Linux |
| Computer skills | Advanced |
| Stability | No |
| Maintained | No |
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No version available
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Publication for MetaGUN
MetaGUN citations
(2)Gene Prediction in Metagenomic Fragments with Deep Learning
[…] dictor, we also implemented Meta-MFDL on TesData700 and TesData120 testing datasets derived from 13 species (i.e., 10 bacteria and 3 archaea) and compared with Orphelia [, ], FragGeneScan [], MGC [], MetaGUN [], and Meta-MFSVM predictors. The overall accuracies of Meta-MFDL, Meta-MFSVM, Orphelia, FragGeneScan, MGC, and MetaGUN on the two independent testing datasets (i.e., TesData700 and TesData12 […]
An introduction to the analysis of shotgun metagenomic data
[…] y gene that has been discovered to date. There are several tools that can be used for de novo gene prediction, including MetaGene (), Glimmer-MG (), MetaGeneMark (), FragGeneScan (), Orphelia (), and MetaGun (). In , many of these methods were compared using statistical simulations. The authors found that their performance varied as a function of read properties (e.g., length and sequencing error […]
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