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metahdep specifications

Information


Unique identifier OMICS_02121
Name metahdep
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 1.38.0
Stability Stable
Requirements
methods, R(>=2.10), affyPLM
Maintained Yes

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Publication for metahdep

metahdep in publications

 (2)
PMCID: 4937411
PMID: 27388145
DOI: 10.1038/srep28974

[…] is appropriate., the response ratio was calculated in the r package metafor. to account for the sampling dependence in our dataset, we used a hierarchical bayes linear model (hblm) in r package metahdep. the hblm is a method that allows controlling for sampling dependence, something that is particularly important in our dataset which had multiple data points obtained within a given study […]

PMCID: 4303931
PMID: 25557183
DOI: 10.1111/nph.13238

[…] standard error of the coefficients by the 95% quantile of a t-distribution with n-k degrees of freedom. our analysis was carried out using r 3.1.0 (r core development team, ) with the r package metahdep (stevens & nicholas, ). further details of the methods and our study design, including the full dataset and r code used in the paper, can be found in our supporting information methods […]

metahdep institution(s)
Department of Mathematics and Statistics, Utah State University, Logan, UT, USA

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