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Focuses on the collection of information concerning mammalian imprinted genes. MetaImprint incorporates 539 imprinted genes, including 255 experimentally confirmed genes, and their detailed research courses from eight mammalian species. MetaImprint also hosts genome-wide genetic and epigenetic information of imprinted genes, including imprinting control regions, single nucleotide polymorphisms (SNPs), non-coding RNAs, DNA methylation and histone modifications. Information related to human diseases and functional annotation was also integrated into MetaImprint. To facilitate data extraction, MetaImprint supports multiple search options, such as by gene ID and disease name. Moreover, a configurable Imprinted Gene Browser was developed to visualize the information on imprinted genes in a genomic context.

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MetaImprint classification

  • Animals
    • Bos taurus
    • Homo sapiens
    • Mus musculus
    • Rattus norvegicus

MetaImprint specifications

Restrictions to use:
None
Database management system:
MySQL
Data access:
File download, Web user interface
Programming languages:
Java, Javascript
Community driven:
No
User data submission:
Allowed

MetaImprint support

Documentation

Maintainer

  • Yan Zhang <>

Credits

Publications

Institution(s)

College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, China; School of Life Science and Technology, State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin, China

Funding source(s)

This work was supported in part by the National Natural Science Foundation of China (61203262, 31371334, 31171383 and 31371478) and the Science Foundation of Heilongjiang Province (QC2011C061).

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