MetaMine statistics

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Citations per year

Number of citations per year for the bioinformatics software tool MetaMine

Tool usage distribution map

This map represents all the scientific publications referring to MetaMine per scientific context
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MetaMine specifications


Unique identifier OMICS_15633
Name MetaMine
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Medium
Stability No
Maintained No


No version available


This tool is not available anymore.

Publication for MetaMine

MetaMine citation


A Primer on Metagenomics

PLoS Comput Biol
PMCID: 2829047
PMID: 20195499
DOI: 10.1371/journal.pcbi.1000667

[…] e comparative metagenomic analysis, as well as taxonomic mapping . ShotgunFunctionalizeR is a stand-alone analysis tool for metagenomics samples written in R . The resource includes include MetaMine for annotating genes using neighboring ORF information, and MetaLook for organization of sequences using customized habitat criteria. CAMERA ( offers to BLAST the u […]

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MetaMine institution(s)
Ttz Bremerhaven, Bremerhaven, Germany; Max Planck Institute for Marine Microbiology, Bremen, Germany; Jacobs University Bremen, Bremen, Germany
MetaMine funding source(s)
This work was supported by the FP6 EU project MetaFunctions (grant CT 511784), the Network of Excellence "Marine Genomics Europe" and the Max Planck Society.

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