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MetAMOS | A modular and open source metagenomic assembly and analysis pipeline

Allows metagenomic assembly and analysis. MetAMOS is a modular and customizable framework providing a pushbutton solution for analysis of metagenomic datasets, irrespective of the sequencing technology used. The software integrates many metagenomic analysis tools that can be tailored and extended to meet specific analysis needs. It is built around the features provided by the metagenomic scaffolder Bambus 2.

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MetAMOS forum

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MetAMOS classification

MetAMOS specifications

Unique identifier:
OMICS_01426
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS
Computer skills:
Advanced
Stability:
Stable
Software type:
Package/Module, Pipeline/Workflow
Restrictions to use:
None
Programming languages:
C++, Java, Perl, Python
Version:
v1.5rc3
Maintained:
Yes

Subtools

  • iMetAMOS

MetAMOS distribution

versioning

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No versioning.

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MetAMOS support

Documentation

Maintainer

  • JIGSAW Team <>

Additional information

http://cbcb.umd.edu/software/metAMOS http://metamos.readthedocs.io/en/v1.5rc3/

Credits

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Publications

Institution(s)

National Biodefense Analysis and Countermeasures Center, Frederick, MD, USA

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