MetaPathwayHunter specifications

Information


Unique identifier OMICS_20198
Name MetaPathwayHunter
Software type Application/Script
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages C++, Java
Computer skills Medium
Version 1.1
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Ron Pinter <>

Publication for MetaPathwayHunter

MetaPathwayHunter in publications

 (2)
PMCID: 5148114
PMID: 27936108
DOI: 10.1371/journal.pone.0168044

[…] were devoted to aligning metabolic pathways in this way [, –]. for example, pinter et al. [] used enzyme graph to describe metabolic pathway and proposed a tree-based pathway search method called metapathwayhunter to align the enzyme graphs by using a graph theoretic approach. although metapathwayhunter obtains a high efficiency in the alignments, the pathways are restricted to trees. […]

PMCID: 3009510
PMID: 20122211
DOI: 10.1186/1471-2105-11-S1-S38

[…] given the other. this method is more efficient when dealing with large metabolic networks than most other known comparison methods., still, to the best of our knowledge, to date (except for the metapathwayhunter, mph, alignment algorithm of [] on which our paper is based) no one has used a score that reflects both the pathway structure as well as the identity of the enzymes in such studies […]


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MetaPathwayHunter institution(s)
Department of Computer Science, Technion–Israel Institute of Technology, Haifa, Israel
MetaPathwayHunter funding source(s)
Supported by the Aly Kaufman Post-Doctoral Fellowship; the Bar-Nir Bergreen Software Technology Center of Excellence; the Yeshaya Horowitz Association through the Center for Complexity Science and the Planning and Budgeting Committee of the Council for Higher Education in Israel.

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