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A modular software pipeline for integrated analysis of environmental sequence information. MetaPathways performs a series of popular analyses for taxonomic profiling and functional potential with limited data handling, allowing researchers to spend their time analyzing their data instead of performing complicated data transformations. MetaPathways v2.0 incorporating a graphical user interface (GUI) and refined task management methods.

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MetaPathways forum

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MetaPathways versioning

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MetaPathways classification

MetaPathways specifications

Software type:
Package
Restrictions to use:
None
Programming languages:
C, C++, Perl, Python
Computer skills:
Advanced
Stability:
Stable
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU General Public License version 2.0
Version:
MetaPathways version 2.5.2
Requirements:
GCC compiler, NCBI BLAST 2.2.25+, Pathway Tools 16.0

MetaPathways support

Maintainer

Credits

Publications

Institution(s)

Department of Microbiology & Immunology, University of British Columbia, Vancouver, BC V6T1Z3, Canada; Graduate Program in Bioinformatics, University of British Columbia, Vancouver, BC Canada

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