MetaProb specifications

Information


Unique identifier OMICS_12706
Name MetaProb
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++
Computer skills Advanced
Stability Stable
Requirements
Boost, Eingen
Maintained Yes

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Maintainer


  • person_outline Matteo Comin <>

Publication for MetaProb

MetaProb in publication

PMCID: 5731601
PMID: 29244002
DOI: 10.1186/s12864-017-4273-6

[…] in this study we aim to improve the recall in order to reduce the number of unclassified reads, that is one of the major issues when analyzing real microbiome datasets., recently, we have develop metaprob [] a method for binning metagenomic reads. metaprob is able to effectively group reads together to form bins of reads that represent candidate species. as several other binning tools like […]


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MetaProb institution(s)
Department of Information Engineering, University of Padova, Padova, Italy
MetaProb funding source(s)
This work was partially supported by the Italian MIUR project PRIN20122F87B2.

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