Metastats statistics
Tool stats & trends
Looking to identify usage trends or leading experts?

Protocols
Metastats specifications
Information
Unique identifier | OMICS_07814 |
---|---|
Name | Metastats |
Interface | Web user interface |
Restrictions to use | None |
Computer skills | Basic |
Stability | Stable |
Maintained | Yes |
Maintainer
- person_outline James Robert White
Publication for Metastats
Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples
Metastats citations
(200)High species diversity of trichostrongyle parasite communities within and between Western Canadian commercial and conservation bison herds revealed by nemabiome metabarcoding
[…] ac) between the cow-calf production groups compared to the feeder production groups for the commercial herds was 0.256381.Beta diversity, at the species level, among populations was assessed with the MetaStats function in Mothur (pairwise P-values provided in Additional file : Table S2 and differences in species prevalence by animal age for the conservation herds is provided in Additional file : T […]
The fallopian tube microbiome: implications for reproductive health
[…] ere generated using QIIME, and were visualised using the function heatmap.2 in the R gplots library []. Comparisons between paired samples were performed using the non-parametric statistical software Metastats which corrects for multiple comparisons is robust for sparse data []. […]
The impact of storage buffer, DNA extraction method, and polymerase on microbial analysis
[…] r) hypothesis testing was performed to test whether the differential clustering of the PBS samples in the dendrograms was significant. Differences in the 30 most abundant OTUs were assessed using the metastats command in mothur and p-values for differences in individual OTUs were corrected for multiple comparisons using Bonferroni correction. Values of p < 0.05 were considered statistically signif […]
Identification of Major Rhizobacterial Taxa Affected by a Glyphosate Tolerant Soybean Line via Shotgun Metagenomic Approach
[…] Wilcoxon rank-sum test was used to examine the significance of alpha diversity indices. Metastats [], described in detail in our previous studies [,], was used to obtain the relative abundance differences of microbial communities between groups (groups = 2, samples per group ≥ 3). The ob […]
Gastrointestinal microbial community changes in Atlantic cod (Gadus morhua) exposed to crude oil
[…] tion in “Vegan”. Similarity percentage (SIMPER) procedure implemented in “Vegan” was used to quantify the contribution of individual OTUs to the overall Bray-Curtis dissimilarity between the groups. “MetaStats” [] was used to test for OTUs and orders with statistically significant differential abundances between the exposure groups. Only OTUs containing more than 0.1% of the total number of reads […]
Dietary butyrate glycerides modulate intestinal microbiota composition and serum metabolites in broilers
[…] s in the cecal digesta was created by the R package gplots. Relative abundances of taxonomy and OTU were compared between the control and BG-treated group using a permutation test via online software Metastats. The qPCR data were subjected to simple t-test. Significance level was set at 0.05. […]
Citations
Looking to check out a full list of citations?

Metastats reviews
Be the first to review Metastats