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MetaTM specifications

Information


Unique identifier OMICS_09208
Name MetaTM
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability No
Maintained No

Versioning


No version available

Maintainer


This tool is not available anymore.

Publication for MetaTM

MetaTM citations

 (3)
library_books

Heparanase expression upregulates platelet adhesion activity and thrombogenicity

2016
Oncotarget
PMCID: 5129947
PMID: 27129145
DOI: 10.18632/oncotarget.8960

[…] fluorescent platelets (from GFP C57BL mice) were incubated on HUVEC cells with or without heparanase pretreatment (2μg/200μl). The images were captured by confocal microscopy using Carl Zeiss LSM 510 METATM instrument. The total platelet coverage area was measured by Image J software. […]

library_books

MESSA: MEta Server for protein Sequence Analysis

2012
BMC Biol
PMCID: 3519821
PMID: 23031578
DOI: 10.1186/1741-7007-10-82

[…] rious tools, integrating and displaying their results. Most meta-servers focus on one aspect of predictive analysis, for instance, Jpred on secondary structure [], metaPrDOS on disordered regions [], metaTM on transmembrane topology [], Pcons [] and 3D-Jury [] on three-dimensional structure, and CombFunc []and ProKnow [] on function. Other meta-servers incorporate more information to further accel […]

library_books

The Mannose Receptor Mediates Dengue Virus Infection of Macrophages

2008
PLoS Pathog
PMCID: 2233670
PMID: 18266465
DOI: 10.1371/journal.ppat.0040017

[…] ar Probes) and the nuclei stained with DAPI. Stained coverslips were mounted in DakoCytomation fluorescent mounting medium (Dako), and analyzed using either CCD1 (Axioplan) and CCD camera (Spot) or a METATM confocal microscope linked to LSM 510TM software (Carl Zeiss MicroImaging, Inc.). Confocal images were acquired sequentially using the multitrack configuration of the Zeiss METATM to avoid blee […]

Citations

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MetaTM institution(s)
Stockholm Bioinformatics Centre, Albanova, Stockholm University, Stockholm, Sweden

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