Metatranscriptomic sequencing data analysis software tools

Metatranscriptomics is the analysis of the RNA transcripts being expressed by a community at a given point of time

Source text:
(Poretsky et al., 2005) Analysis of microbial gene transcripts in environmental samples. Appl Environ Microbiol.

Data preprocessing

Data processing

Binning

Quantification

Data analysis

Expression

Annotation

Genome-wide association study/Linkage/QTL

Data visualization

Network analysis

Enrichment analysis

Integrative analysis

Workflows

File manipulation

Unclassified tools