MetaXcan specifications

Information


Unique identifier OMICS_11401
Name MetaXcan
Software type Framework/Library, Package/Module
Interface Command line interface
Restrictions to use None
Input data Some GWAS results, a transcriptome prediction model database, or a file with the covariance matrices of the SNPs within each gene model.
Operating system Unix/Linux
Programming languages Python
License MIT License
Computer skills Advanced
Stability Stable
Maintained Yes

Subtools


  • MulTiXcan
  • PrediXcan
  • S-MulTiXcan

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Versioning


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Documentation


Maintainer


  • person_outline Hae Kyung Im <>

Publications for MetaXcan

MetaXcan institution(s)
Department of Public Health Sciences, University of Chicago, Chicago, IL, USA; Department of Human Genetics, University of Chicago, Chicago, IL, USA; Section of Hematology and Oncology, Department of Medicine, University of Chicago, Chicago, IL, USA; Section of Genetic Medicine, Department of Medicine, University of Chicago, Chicago, IL, USA
MetaXcan funding source(s)
Supported by National Cancer Institute (P50-CA125183, R01- CA89085, and U01-CA161032), National Institute of Mental Health (R01- MH107666), National Institute of Diabetes and Digestive and Kidney Diseases (P30 DK020595), American Cancer Society (MRSG-13-063-01-TBG and CRP- 10-119-01-CCE), and NIH (R01 MH107666 and P30 DK020595).

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