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Citations per year

Number of citations per year for the bioinformatics software tool MetaXpress

Tool usage distribution map

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MetaXpress specifications


Unique identifier OMICS_33458
Name MetaXpress
Software type Application/Script
Interface Graphical user interface
Restrictions to use License purchase required
Operating system Unix/Linux
License Commercial
Computer skills Medium
Stability Stable
Maintained Yes


No version available


  • person_outline MetaXpress Team

MetaXpress citations


Repurposing Cytarabine for Treating Primary Effusion Lymphoma by Targeting Kaposi’s Sarcoma Associated Herpesvirus Latent and Lytic Replications

PMCID: 5941074
PMID: 29739902
DOI: 10.1128/mBio.00756-18
call_split See protocol

[…] resulting in the selection of 50 final compounds. Secondary screening was carried out on the ImageXpress Micro System (Molecular Devices), and the surviving cells were automatically quantified using MetaXpress software (Molecular Devices). Compounds that showed effects similar to those of the first-round screening with less than 20% variation were selected. […]


Carbamazepine, a beta cell protecting drug, reduces type 1 diabetes incidence in NOD mice

Sci Rep
PMCID: 5854601
PMID: 29545618
DOI: 10.1038/s41598-018-23026-w
call_split See protocol

[…] in VECTASHIELD HardSet Antifade Mounting Medium (Vector Laboratories, H-1500) and whole slides were imaged using a 10X (NA 0.3) objective on an ImageXpressMICRO robotic microscope and analyzed using MetaXpress 5.0 software (Molecular Devices). Beta-cell area was quantified by normalizing insulin positive area to the respective section size as determined by DAPI staining and was reported as a rati […]


Most bicarbonate secretion by Calu‐3 cells is mediated by CFTR and independent of pendrin

PMCID: 5849580
PMID: 29536650
DOI: 10.14814/phy2.13641
call_split See protocol

[…] expression. Imaging conditions were optimized to avoid pixel saturation. Relative fluorescence intensity measurements (arbitrary units [A.U.]) were analyzed using ImageJ (e.g., Fig. , (Rasband )) or MetaXpress software (Molecular Devices, Sunnyvale CA). […]


A peptide tag specific nanobody enables high quality labeling for dSTORM imaging

Nat Commun
PMCID: 5834503
PMID: 29500346
DOI: 10.1038/s41467-018-03191-2

[…] ration of ~50 ng ml−1 in 5% BSA in TBS-T (0.05% (w/V) Tween) and incubated overnight at 4 °C. Unbound nanobodies were removed by three additional washing steps with TBS-T. Images were acquired with a MetaXpress Micro XL system (Molecular Devices) and ×40 magnification.For staining of endogenous β-catenin, ~5000 HeLa Kyoto cells per well were seeded in a µclear 96-well plate (Greiner Bio One, cat. […]


Evaluation of autophagy inducers in epithelial cells carrying the ΔF508 mutation of the cystic fibrosis transmembrane conductance regulator CFTR

PMCID: 5833759
PMID: 29415993
DOI: 10.1038/s41419-017-0235-9

[…] cubation at 4 °C. Nuclei were stained with 10 μM Hoechst 33342 (Molecular Probes-Invitrogen).Images were acquired using an ImageXpress Micro XLS Widefield High-Content Analysis System operated by the MetaXpress® Image Acquisition and Analysis Software (Molecular Devices, Sunnyvale, CA, USA). Acquisition of Hoechst 33342 and GFP signal was performed by means of a 20× PlanApo objective (Nikon, Tokyo […]


Function of B Cell CLL/Lymphoma 11B in Glial Progenitor Proliferation and Oligodendrocyte Maturation

PMCID: 5787563
PMID: 29416501
DOI: 10.3389/fnmol.2018.00004
call_split See protocol

[…] ition to the morphological observations of OLG differentiation from GPCs or OPCs, OLG differentiation was evaluated by measurement of OLG cell-marker expression intensity, as described previously (). MetaXpress software (Molecular Devices; Sunnyvale, CA, United States) and NIH ImageJ analysis software were used. Five randomly selected images (5–10 cells per image) were captured from each immunosta […]

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MetaXpress institution(s)
Molecular Devices LLC, San Jose, CA, USA

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