MetExplore statistics

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Popular tool citations

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Associated diseases

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MetExplore specifications

Information


Unique identifier OMICS_02720
Name MetExplore
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Subtool


  • MetaboRank

Publications for MetExplore

MetExplore in publications

 (12)
PMCID: 5749025
PMID: 29291722
DOI: 10.1186/s12859-017-2006-0

[…] duplicated entries and might present false positives. the performance of over-representation analysis (ora) tools, including biocyc/humancyc, consensuspathdb, impala, mbrole, metaboanalyst, metabox, metexplore, mpea, pathvisio and reactome and the mapping tool keggrest, was examined. results were mostly consistent among tools and between real and enriched data despite the variability […]

PMCID: 5627583
PMID: 29043062
DOI: 10.5256/f1000research.13363.r25758

[…] metabolomes. the curated data (spectra, compounds, networks) and workflows will be of high value as input for the corresponding reference repositories and e-infrastructures (metabolights, chebi, metexplore, workflow4metabolomics, phenomenal)., europe is a major provider of massive and high-quality metabolomics data. large endeavors such as the mrc-nihr national phenome centre ( […]

PMCID: 5192453
PMID: 28009836
DOI: 10.3390/metabo6040047

[…] (pricked with an aseptic needle), and unmanipulated (positive control). we performed metabolic measurements seven days after sepsis. we then implemented metabolites detected in nmr spectra into the metexplore web server in order to identify the metabolic pathway alterations in sepsis surviving drosophila. our nmr metabolomic approach in a drosophila model of recovery from sepsis clearly […]

PMCID: 5061431
PMID: 27732672
DOI: 10.1371/journal.ppat.1005939

[…] like blast through various databases and links to the bibliography for the blast hits, prediction of gene product localization, prediction of ec number. dead-end reactions were computed thanks to metexplore [] and the gap filling was performed by reassessment of pathway context through the previously listed tools and databases. transport reactions as well as assimilation pathways of various […]

PMCID: 4931573
PMID: 27373593
DOI: 10.1038/srep29182

[…] also on the production of pdo. hence associating k. pneumoniae with a methanogen has been proposed to reduce such effect., all the genome-scale models (gems) used were extracted from kegg using metexplore. in both examples, cofactors and co-enzymes obtained from a list available in kegg were removed. the networks, constructed as explained previously, were filtered using a lossless […]


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MetExplore institution(s)
INRA, UMR1089, Xénobiotiques, Toulouse, France

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