MetFamily statistics

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Citations per year

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Tool usage distribution map

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Associated diseases

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MetFamily specifications

Information


Unique identifier OMICS_23634
Name MetFamily
Interface Web user interface
Restrictions to use None
Input data A metabolite profile.
Programming languages R
License GNU General Public License version 3.0
Computer skills Basic
Version 1.0
Stability Stable
Source code URL https://codeload.github.com/Treutler/MetFamily/zip/master
Maintained No

Maintainer


This tool is not available anymore.

Additional information


https://msbi.ipb-halle.de/MetFamily/session/46902b17e287b88d90678cfdb7dd7ea6/download/downloadDocUserGuide?w= https://github.com/Treutler/MetFamily

Publication for MetFamily

MetFamily in publication

PMCID: 5499862
PMID: 28520864
DOI: 10.1093/gigascience/gix037

[…] approach to produce hierarchical trees based on compound similarity to assist visualization of chemical overlap between molecular datasets and the extraction of structure–activity relationships. metfamily [] groups metabolites into families based on an integrated analysis of ms1 abundances, with ms/ms facilitating further data interpretation. metcirc [] is an r tool that is particularly […]


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MetFamily institution(s)
Leibniz Institute of Plant Biochemistry, Dept. of Cell and Metabolic Biology, Halle/Saale, Germany; Leibniz Institute of Plant Biochemistry, Dept. of Stress and Developmental Biology, Halle/Saale, Germany; Leibniz Institute of Plant Biochemistry, Dept. of Bioorganic Chemistry, Halle/Saale, Germany; RIKEN Center for Sustainable Resource Science, Yokohama, Japan

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