MethLAB specifications

Unique identifier:
OMICS_00797
Interface:
Command line interface, Graphical user interface
Input data:
The phenotype file, the methylation file, and the annotation file.
Output data:
A text file that contains the t-statistics, p-values and flags indicating the Bonferroni/Holm significance and FDR significance of each CpG site for a given model, Q-Q Plots, Manhattan Plot, plots of individual CpG sites and a log file.
Programming languages:
R
Version:
2.0
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Input format:
TXT or CSV
Operating system:
Unix/Linux
Computer skills:
Medium
Stability:
Stable

versioning

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MethLAB distribution

download

MethLAB support

Documentation

Maintainers

  • Karen N. Conneely <>
  • Varun Kilaru <>

forum

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Credits

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Publications

Institution(s)

Department of Psychiatry and Behavioral Sciences, Emory University, Atlanta, GA, USA; Department of Biostatistics and Bioinformatics, Emory University, Atlanta, GA, USA; Genetics and Molecular Biology Program, Emory University, Atlanta, GA, USA; Department of Human Genetics, Emory University, Atlanta, GA, USA

Funding source(s)

Supported in part by the National Institute of Mental Health (MH088609 and MH085806).

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