MethMarker statistics

Tool stats & trends

Looking to identify usage trends or leading experts?

MethMarker specifications


Unique identifier OMICS_00636
Name MethMarker
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Advanced
Stability Stable
Maintained Yes


No version available

Publication for MethMarker

MethMarker citations


Ambiguity and variability of database and software names in bioinformatics

J Biomed Semantics
PMCID: 4485340
PMID: 26131352
DOI: 10.1186/s13326-015-0026-0

[…] requently matched within GO database identifiers (e.g., GO:0007089) because of inappropriate tokenisation). Some common false negatives (i.e., missed resource mentions) included Tabasco (PMC2242808), MethMarker (PMC2784320), xPedPhase and i Linker (both from PMC2691739). In each of these examples, the name missed (numerous times) was the resource being introduced in that paper. This shows that any […]


Report on the 2nd Annual Infinium Humanmethylation450 Array Workshop

PMCID: 3891693
PMID: 23949542
DOI: 10.4161/epi.26073

[…] 450k analysis tool developed in his group, RnBeads ( Other tools mentioned, in which Dr Bock is a contributor, included EpiExplorer, EpiGRAPH, BiQ Analyzer, and MethMarker. Finally, Dr Bock presented GoDMC (Genetics of DNA Methylation Consortium) that facilitates genome-wide association studies of DNA methylation. This consortium has been organized to bring t […]


Aberrant DNA Methylation and Prostate Cancer

Curr Genomics
PMCID: 3219844
PMID: 22547956
DOI: 10.2174/138920211797904061

[…] the length of the resulting fragments will be used to determine the methylation state and site-specificity []. The restriction enzyme catalogue of New England Biolab (NEB), NEB database REBASE [] and MethMarker can provide a comprehensive list of methylation-sensitive restriction enzymes to be used in setting up a COBRA experiment. […]


Looking to check out a full list of citations?

MethMarker institution(s)
Max-Planck-Institut für Informatik, Saarbrücken, Germany

MethMarker reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review MethMarker