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Popular tool citations

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Associated diseases

Associated diseases

MetLab specifications


Unique identifier OMICS_18068
Name MetLab
Software type Pipeline/Workflow
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Version 0.2.0
Stability Stable
Maintained Yes



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  • person_outline Juliette Hayer <>

Publication for MetLab

MetLab in publications

PMCID: 5943576
PMID: 29743495
DOI: 10.1038/s41598-018-25412-w

[…] e(sgr,%)=100×[(lnfinalbodyweight−lninitialbodyweight)×days−1, the proc nlin was used to fit exponential curves for glucose concentration during 48 hours gtt, using the following equation performed by metlab2017:3\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} […]

PMCID: 5924777
PMID: 29740407
DOI: 10.3389/fmicb.2018.00749

[…] user-provided database for filtering, providing more flexibility but requiring more user-input. this is seen in imsa (dimon et al., ), virushunter (zhao et al., ), virfind (ho and tzanetakis, ), and metlab (norling et al., ), although other workflows may accept custom references as well. in total, 22 workflows filter non-virus reads prior to further analysis (figure , table ). popular filter […]

PMCID: 5630599
PMID: 28986567
DOI: 10.1038/s41598-017-12972-6

[…] 15 minutes. then the same blood vessels were imaged again to compare potential changes in vessel diameter and red blood cell (rbc) velocity after light stimulation. imaging analyses were made with metlab and nih imagej software. vessel diameters were manually measured from the maximum distance of longitudinal sections of the vessels. rbc velocity was determined from line-scan images using […]

PMCID: 5511264
PMID: 28710496
DOI: 10.1038/s41598-017-05595-4

[…] in 100 μl 99% methanol for hplc analysis or growth medium for cell growth assays., for hplc analysis, samples were diluted in acetonitrile and a 20 μl sample analysed on a reverse-phase c18 column (metlab supplies) with a mobile phase of acetonitrile:water with 0.1% formic acid (65:35) and 1 ml/min flow rate. pitavastatin was detected with an excitation of 245 nm and an emission of 420 nm […]

PMCID: 5360640
PMID: 28373765
DOI: 10.3748/wjg.v23.i11.1990

[…] and recorded the experimental data; pan f performed the animal experiments and recorded the experimental data; hong n instructed the animal experiments and revised the manuscript; deng j wrote the metlab program of the bi-exponential ivim model and analyzed the ivim parameter data., correspondence to: yi wang, md, department of radiology, peking university people’s hospital, 11 xizhimen south […]

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MetLab institution(s)
National Bioinformatics Infrastructure Sweden (NBIS), Uppsala University, Uppsala, Sweden; SLU Global Bioinformatics Centre, Department of Animal Breeding and Genetics (HGEN), Swedish University of Agricultural Sciences (SLU), Uppsala, Sweden; Department of Biomedical Sciences and Veterinary Public Health (BVF), Swedish University of Agricultural Sciences (SLU), Uppsala, Sweden; The OIE Collaborating Centre for the Biotechnology-based Diagnosis of Infectious Diseases in Veterinary Medicine, Uppsala, Sweden
MetLab funding source(s)
Supported by The Swedish Research Council for Environment, Agricultural Sciences and Spatial Planning, Formas (221-2012-586) and by grants from the framework of the EU project AniBioThreat (grant agreement: Home/ 2009/ISEC/AG/191) with financial support from the Prevention of and Fight against Crime Programme of the European Union, European Commission— Directorate General Home Affairs.

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