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MetMSLine specifications


Unique identifier OMICS_07837
Name MetMSLine
Software type Pipeline/Workflow
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Maintained Yes


No version available

Publication for MetMSLine

MetMSLine citation


From chromatogram to analyte to metabolite. How to pick horses for courses from the massive web resources for mass spectral plant metabolomics

PMCID: 5499862
PMID: 28520864
DOI: 10.1093/gigascience/gix037

[…] metabolomics datasets. the clustering algorithm is based on 1-dimensional self-organizing maps, and the software additionally provides functions for metabolite annotation and pathway reconstruction. metmsline [] is an r package that works with processed data providing a series of statistical analysis steps focusing on biomarker discovery combined with metabolite annotation based on exact mass […]

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MetMSLine institution(s)
Department of Biomarkers, Nutrition and Metabolism Section, International Agency for Research on Cancer (IARC), Lyon, France

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