MetSizeR specifications

Information


Unique identifier OMICS_30265
Name MetSizeR
Software type Package/Module
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.1
Stability Stable
Requirements
mvtnorm, MetabolAnalyze, cairoDevice, gWidgets, gWidgetsRGtk2
Source code URL https://cran.r-project.org/src/contrib/MetSizeR_1.1.tar.gz
Maintained Yes

Versioning


No version available

Documentation


Maintainers


  • person_outline Gift Nyamundanda
  • person_outline Claire Gormley

Publication for MetSizeR

MetSizeR citation

library_books

Urine metabolomics in neonates with late onset sepsis in a case control study

2017
Sci Rep
PMCID: 5379623
PMID: 28374757
DOI: 10.1038/srep45506

[…] The MetSizeR R-package was used for the calculation of the sample size needed to find significant changes in 10–30% out of a total of 90–110 metabolites studied. The target false discovery rate (FDR) was […]

MetSizeR institution(s)
School of Mathematical Sciences, University College Dublin, Dublin, Ireland; School of Biomolecular and Biomedical Science, University College Dublin, Dublin, Ireland; School of Agriculture and Food Science, Conway Institute, University College Dublin, Dublin, Ireland
MetSizeR funding source(s)
Supported by the Irish Research Council for Science Engineering and Technology (IRCSET) funded PhD Programme in Bioinformatics and Systems Biology in University College Dublin, Ireland.

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