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MeV specifications

Information


Unique identifier OMICS_00781
Name MeV
Alternative names Multiple experiment Viewer, WebMeV
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
Computer skills Medium
Version 4.9.0
Stability Stable
Maintained Yes

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Additional information


Standalone version: https://sourceforge.net/projects/mev-tm4/

Information


Unique identifier OMICS_00781
Name MeV
Alternative names Multiple experiment Viewer, WebMeV
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Additional information


Standalone version: https://sourceforge.net/projects/mev-tm4/

Publication for Multiple experiment Viewer

MeV in pipeline

2018
PMCID: 5866023
PMID: 29436647
DOI: 10.3892/mmr.2018.8560

[…] differentially expressed were identified by a volcano plot. finally, hierarchical clustering was performed to determine the differences in the mirna expression profiles among the samples using webmev software (version 4.6; http://mev.tm4.org/) ()., to further investigate the functional roles of mirna, the putative targets of mir-449a-5p, mir-34b/c-5p and mir-21-5p were predicted […]

MeV in publications

 (2)
PMCID: 5866023
PMID: 29436647
DOI: 10.3892/mmr.2018.8560

[…] differentially expressed were identified by a volcano plot. finally, hierarchical clustering was performed to determine the differences in the mirna expression profiles among the samples using webmev software (version 4.6; http://mev.tm4.org/) ()., to further investigate the functional roles of mirna, the putative targets of mir-449a-5p, mir-34b/c-5p and mir-21-5p were predicted […]

PMCID: 5791736
PMID: 29290589
DOI: 10.1016/j.devcel.2017.11.024

[…] normalised according to the measure protein concentration of the corresponding soluble sample in sds lysis buffer. then the top 20 proteins clustered by mad analysis on basis of lfq values using webmev were presented in the heatmap in ., 1st strand cdna was synthesised from total rna using qscript cdna supermix according to manufacturer’s instructions. qpcr was performed on an applied […]

MeV institution(s)
Center for Cancer Computational Biology, Dana-Farber Cancer Institute, Boston, MA, USA
MeV funding source(s)
Supported by a grant from the US National Cancer Institute, through its Informatics Technology for Cancer Research program (5U01CA151118).

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Desktop
MeV is a java-based desktop application with extensive capability for array and RNAseq clustering, machine learning methods (SVM), statistical analysis (t-test, ANOVA, SAM, Rank Product, edgeR, Degseq, etc.), data mining and visualization tools in an easy-to-learn graphical user interface.