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|Alternative name||Masked, Filtered and Smoothed Position-Specific Scoring Matrix-based Predictor|
|Interface||Web user interface|
|Restrictions to use||None|
Publication for Masked, Filtered and Smoothed Position-Specific Scoring Matrix-based Predictor
Predicting MoRFs in protein sequences using HMM profiles
[…] 70 amino acids and are often described as disordered domains.Several predictors have been developed to identify SLiMs and MoRFs in disordered protein sequences [, ], namely, MoRFpred , ANCHOR [, ], MFSPSSMpred , γ-MoRF-PredII , SliMpred , SLiMDis  and SliMFinder . Considering all of the above predictors, the methods for identifying SLiMs and MoRFs are different even though SLiMs and Mo […]
MoRFchibi SYSTEM: software tools for the identification of MoRFs in protein sequences
[…] may be present, sequences in TEST_EXP53 are annotated with all known MoRFs.We also used a third test set, TEST_EXP9, to compare the prediction quality of the MoRFchibi SYSTEM predictors with that of MFSPSSMpred and DISOPRED3. These two SVM-RBF predictors are trained on an extended set of MoRFs including most of those found in our TEST_HT and TEST_EXP53 sets. The nine sequences of TEST_EXP9, colle […]
Computational Identification of MoRFs in Protein Sequences Using Hierarchical Application of Bayes Rule
[…] esults demonstrate that MoRFCHiBi_Web outperforms all three predictors. Furthermore, MoRFCHiBi_Web generates less than half the false positive rate of other predictors at most cut-off values. Because MFSPSSMpred and DISOPRED3 use a different set of training data, we have to rely on a small set of only 9 sequences, EXP9, collected by the authors of the latter to compare the performance of these two […]
An Overview of Practical Applications of Protein Disorder Prediction and Drive for Faster, More Accurate Predictions
[…] osed for disorder-based rational drug design or discovery [,,,,]. Thus, several protein disorder prediction methods have been applied to aid in new drug target discovery or design. One method, called MFSPSSMpred (masked, filtered and smoothed position-specific scoring matrix-based predictor)  was proposed to identify MoRFs (molecular recognition features), short disorder-to-order binding regions […]
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