MGcV pipeline

MGcV specifications

Information


Unique identifier OMICS_05806
Name MGcV
Alternative name Microbial Genomic context Viewer
Interface Web user interface
Restrictions to use None
Programming languages Javascript, Python
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Lex Overmars <>

Publication for Microbial Genomic context Viewer

MGcV IN pipelines

 (2)
2016
PMCID: 5133452
PMID: 27994575
DOI: 10.3389/fmicb.2016.01912

[…] that produces spores with low-level heat resistance (supplementary data sheet 1). the genomic organization of the tn1546 transposon was visualized using the artemis comparison tool (act), and using microbial genomic context viewer (mgcv) (carver et al., 2005, 2012; overmars et al., 2013). for the identified tn1546 transposons, operon predictions were performed using fgenesb […]

2016
PMCID: 5133452
PMID: 27994575
DOI: 10.3389/fmicb.2016.01912

[…] heat resistance (supplementary data sheet 1). the genomic organization of the tn1546 transposon was visualized using the artemis comparison tool (act), and using microbial genomic context viewer (mgcv) (carver et al., 2005, 2012; overmars et al., 2013). for the identified tn1546 transposons, operon predictions were performed using fgenesb (http://www.softberry.com). additionally, manual […]

MGcV institution(s)
Centre for Molecular and Biomolecular Informatics, Radboud University Nijmegen Medical Centre, Nijmegen, The Netherlands; TI Food and Nutrition, Wageningen, The Netherlands; Netherlands Bioinformatics Centre, Nijmegen, The Netherlands; Microbial Bioinformatics, Ede, The Netherlands; CFLSc, Eindhoven, The Netherlands
MGcV funding source(s)
Supported by the Netherlands Genomics Initiative (NGI).

MGcV reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review MGcV