mGenomeSubtractor specifications

Information


Unique identifier OMICS_20473
Interface Web user interface
Restrictions to use None
Output data mGenomeSubtractor-generated ‘core’ and/or ‘accessory’ reference genome regions by merging adjacent genes classified as ‘conserved’ or ‘strain-specific and a graphical output comprising a circular map of the reference genome that highlights the locations and sizes of identified core and accessory regions within this reference template.
Computer skills Basic
Version 1.5
Stability Stable
Maintained Yes

Taxon


  • Eubacteria

Maintainer


  • person_outline Hong-Yu Ou <>

Additional information


http://202.120.12.134/mGS2/Instruction_mGenomeSubtractor.htm#partial

mGenomeSubtractor article

mGenomeSubtractor institution(s)
Laboratory of Microbial Metabolism and School of Life Sciences & Biotechnology, Shanghai Jiaotong University, China; Department of Infection, Immunity and Inflammation, Leicester Medical School, University of Leicester, Leicester, UK; Department of Clinical Microbiology, University Hospitals of Leicester NHS Trust, Leicester, UK
mGenomeSubtractor funding source(s)
Supported by National Natural Science Foundation of China (30871345, 30700013, 30970080 and 30821005); a Royal Society—National Natural Science Foundation of China International Joint Project grant (2007/R3); Chen Xing young scholars programme, Shanghai Jiaotong University.

mGenomeSubtractor review

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Thomas Guiraud

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Web
Easy to use but some features doesn't work.

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