MGmapper specifications


Unique identifier OMICS_18201
Name MGmapper
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Single or paired-end reads
Input format FASTQ
Output data Performs sequence mapping and taxonomy annotation.
Output format BAM, TXT, XLS
Operating system Unix/Linux, Mac OS, Windows
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Thomas Sicheritz Pontén <>
  • person_outline Thomas Nordahl Petersen <>

Publication for MGmapper

MGmapper institution(s)
Department of Bio and Health Informatics, Technical University of Denmark, Kongens Lyngby, Denmark; National Food Institute, Technical University of Denmark, Kongens Lyngby, Denmark
MGmapper funding source(s)
Supported by the European Community’s Seventh Framework Programme [FP7/2007–2013], under grant agreement n˚ 613754, and by The Villum Foundation (VKR023052).

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