MICA-aligner specifications

Unique identifier:
OMICS_08621
Software type:
Package/Module
Restrictions to use:
None
Output data:
SAM/BAM format
Programming languages:
C++
License:
BSD 2-clause “Simplified” License
Stability:
Stable
Name:
MICA-aligner
Interface:
Command line interface
Input data:
Reference sequences in the commonly known FASTA format and short reads in FASTA/FASTQ format (in uncompressed or GZIP format)
Operating system:
Unix/Linux
Parallelization:
CUDA
Computer skills:
Advanced
Maintained:
Yes

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MICA-aligner support

Documentation

Maintainer

  • Tak-Wah Lam <>

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Publications

Institution(s)

HKU-BGI Bioinformatics Algorithms and Core Technology Research Laboratory, The University of Hong Kong, Hong Kong

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