Microarray data analysis bioinformatics software tools

Microarray applications

Microarray data analysis bioinformatics software tools

Most Recent Tools

Desktop app
Affinity Propagation… Affinity Propagation Clustering

APCluster Affinity Propagation Clustering

Allows for determining typical cluster members. APCluster provides leveraged…

Allows for determining typical cluster members. APCluster provides leveraged affinity propagation and an algorithm for exemplar-based agglomerative clustering that can also be used to join clusters…

Desktop app
The Clustering of… The Clustering of Regression Models Method

CORM The Clustering of Regression Models Method

Clusters genes using gene expression data and provides data examples…

Clusters genes using gene expression data and provides data examples illustrating each clustering function in the package. CORM can be applied to cluster gene expression data collected under various…

Desktop app
Misclassification-Penalized Posterior

MiPP Misclassification-Penalized Posterior

Assesses the performance of a prediction model. MiPP assesses the sum of the…

Assesses the performance of a prediction model. MiPP assesses the sum of the posterior classification probabilities penalized by the number of incorrectly classified samples. It has shown that the…

Desktop app
GeneNT GeneNT

GeneNT

An improved gene clustering approach for inferring gene signaling pathways from…

An improved gene clustering approach for inferring gene signaling pathways from gene microarray data. geneNT has the following features: (i) it tends to group functionally related genes into a tight…

Most Popular Tools

Web app
VENNY VENNY

VENNY

An interactive tool for comparing lists with Venn Diagrams.

An interactive tool for comparing lists with Venn Diagrams.

Desktop app
ASCAT ASCAT

ASCAT

A tool for accurate dissection of genome-wide allele-specific copy number in…

A tool for accurate dissection of genome-wide allele-specific copy number in tumors.

Desktop app
G T A T C G C T A kmerHMM kmerHMM

kmerHMM

Motif Discovery on Protein Binding Microarray (PBM) data using Hidden Markov…

Motif Discovery on Protein Binding Microarray (PBM) data using Hidden Markov Model and Belief Propagation.

Web app
Genevestigator Genevestigator

Genevestigator

An innovative online platform to help you interpret your results, prioritize…

An innovative online platform to help you interpret your results, prioritize targets and biomarkers, identify correlated genes, discover novel disease-specific genes, or simply to explore the…

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