A web-based infrastructure for reliable and secure microarray gene expression data management and analysis that provides an online service for the scientific community. The LCB-DWH is an effort towards a complete system for storage (using the BASE system), analysis and publication of microarray data. Important features of the system include: access to established methods within R/Bioconductor for data analysis, built-in connection to the Gene Ontology database and a scripting facility for automatic recording and re-play of all the steps of the analysis.
Provides a repository of probes from Arabidopsis thaliana generated by AnnotationForge. Ath1121501probe includes information about probe sequence, its x et y coordinate on the array, the Affymetrix probe set name, its probe interrogation position and the target strandedness.