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Microarray interconversion software tools | Microarray data analysis

Robust conversion between microarray platforms is needed to leverage the wide variety of microarray expression studies that have been conducted to date. Currently available conversion methods rely on manufacturer annotations, which are often…
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DAVID
Web

DAVID Database for Annotation, Visualization and Integrated Discovery

A web-based online bioinformatics resource that aims to provide tools for the…

A web-based online bioinformatics resource that aims to provide tools for the functional interpretation of large lists of genes/proteins. DAVID has been used by researchers from more than 5000…

GeneAnnot
Dataset

GeneAnnot

Explores the relationship between probe sets and genes. GeneAnnot compares the…

Explores the relationship between probe sets and genes. GeneAnnot compares the individual probe sequences with publicly available complementary DNA (cDNA) and predicted genes from GenBank, RefSeq and…

aRrayLasso
Desktop

aRrayLasso

Uses the Lasso-penalized generalized linear model to model the relationships…

Uses the Lasso-penalized generalized linear model to model the relationships between individual probes in different probe sets. We have implemented aRrayLasso in a set of five open-source R functions…

AbsIDconvert
Desktop
Web

AbsIDconvert

A methodology for converting between genomic identifiers by first mapping them…

A methodology for converting between genomic identifiers by first mapping them onto a common universal coordinate system using an interval tree which is subsequently queried for overlapping…

IDconverter…
Web

IDconverter and IDClight

Provide a fast and intuitive way of enriching the information coming out of…

Provide a fast and intuitive way of enriching the information coming out of high-throughput experiments like microarrays. IDconverter and IDClight are two user-friendly, freely available web server…

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