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Microbial genome database for comparative analysis MBGD

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A comprehensive ortholog database for flexible comparative analysis of microbial genomes, where the users are allowed to create an ortholog table among any specified set of organisms. The MyMBGD interface allows the users to upload their own genome data to the MBGD server and incorporate them into ortholog analysis by calculating all-against-all similarities between the uploaded genomes and the prestored complete genomes, followed by ortholog clustering. The users can now specify the draft genomes prestored in MBGD in addition to the uploaded user genomes as the target of analysis.

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MBGD classification

  • Eubacteria

MBGD specifications

Restrictions to use:
None
Maintained:
Yes

MBGD support

Maintainer

  • Ikuo Uchiyama <>

Credits

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Publications

Institution(s)

Laboratory of Genome Informatics, National Institute for Basic Biology, National Institutes of Natural Sciences, Nishigonaka, Myodaiji, Okazaki, Aichi, Japan; Data Integration and Analysis Facility, National Institute for Basic Biology, National Institutes of Natural Sciences, Nishigonaka, Myodaiji, Okazaki, Aichi, Japan; Dynacom Co, Ltd, Onoedori, Chuo-ku, Kobe, Hyogo, Japan

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