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MicroInspector specifications

Information


Unique identifier OMICS_06690
Name MicroInspector
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability No
Maintained No

Publication for MicroInspector

MicroInspector citations

 (17)
library_books

Identification of microRNAs as potential markers of ovarian toxicity

2018
J Appl Toxicol
PMCID: 5901046
PMID: 29377183
DOI: 10.1002/jat.3583

[…] expression. The online miRNA database miRecords (http://c1.accurascience.com/miRecords) was selected as the most suitable for this study as it integrates 11 target prediction programs (DIANA‐microT, MicroInspector, miRanda, MirTarget2, miTarget, NBmiRTar, PicTar, PITA, RNA22, RNAhybrid and TargetScan) from which extensive lists of both predicted and validated putative miRNA target genes can be ge […]

library_books

Time course responses of circulating microRNAs to three resistance training protocols in healthy young men

2017
Sci Rep
PMCID: 5438360
PMID: 28526870
DOI: 10.1038/s41598-017-02294-y

[…] Supplementary Table . To explore the potential roles of emerging miR-532, we performed a bioinformatics prediction of the possible targets via the use of multiple target prediction databases (DIANA, Microinspector, Miranda, Mirtarget, Mitarget, Nbmirtar, Pictar, Pita, Rna22, Rnahybrid and Targetscan). The targets which were simultaneously predicted by at least five prediction databases were selec […]

library_books

Overexpression of miR 484 and miR 744 in Vero cells alters Dengue virus replication

2017
PMCID: 5354610
PMID: 28327787
DOI: 10.1590/0074-02760160404

[…] tics predictions - For the computational analysis, we followed a strategy established in our laboratory (). Briefly, the sequences of DENV-1 to -4 were downloaded from GenBank, and the free algorithm MicroInspector (www.ncbi.nlm.nih.gov/pmc/articles/PMC1160125/) was used to scan for possible targets of human miRNAs collected in miRBase. Only those target sites common to the four reference sequence […]

call_split

Icaritin inhibits the expression of alpha fetoprotein in hepatitis B virus infected hepatoma cell lines through post transcriptional regulation

2016
Oncotarget
PMCID: 5347802
PMID: 27835879
DOI: 10.18632/oncotarget.13194
call_split See protocol

[…] ttp://genome.ucsc.edu/) and GenBank were used to obtain the AFP 3′-UTR sequence. Websites: RNA22 (https://cm.jefferson.edu/rna22/), RNAhybrid (http://bibiserv.techfak.uni-bielefeld.de/rnahybrid/) and MicroInspector were used to predict miRNAs targeting the 3′-UTR of the AFP mRNA []. Putative target sites for miR-620, miR-1236 and miR-1270 were predicted using RegRNA (http://regrna.mbc.nctu.edu.tw/ […]

library_books

Visceral Adipose MicroRNA 223 Is Upregulated in Human and Murine Obesity and Modulates the Inflammatory Phenotype of Macrophages

2016
PLoS One
PMCID: 5094706
PMID: 27812198
DOI: 10.1371/journal.pone.0165962

[…] In order to identify an appropriate gene target for miR-223, we utilized 11 separate tools for maximal predictive power (DIANA-microT (http://www.diana.pcbi.upenn.edu/cgi-bin/micro_t.cgi), MicroInspector (http://mirna.imbb.forth.gr/microinspector/), miRanda (http://www.microrna.org/), MirTarget2 (http://mirdb.org/), miTarget (http://cbit.snu.ac.kr/~miTarget/), NBmiRTar (http://wotan.wis […]

library_books

Genetic association of the tachykinin receptor 1 TACR1 gene in bipolar disorder, attention deficit hyperactivity disorder, and the alcohol dependence syndrome

2014
Am J Med Genet
PMCID: 4278563
PMID: 24817687
DOI: 10.1002/ajmg.b.32241

[…] ot (http://www.bioinformatics.org/sms2/codon_plot.html), exonic splicing enhancer prediction server RESCUE-ESE [Fairbrother et al., ], Alternative Splice Site Predictor (ASSP) [Wang and Marin, ], and MicroInspector (http://bioinfo.uni-plovdiv.bg/microinspector/). 1000 genomes data [1000 Genomes Project Consortium, ] was downloaded and imputation analysis was performed using IMPUTE2 [Howie et al.,] […]

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MicroInspector institution(s)
Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, Heraklion/Crete, Greece

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