microRPM specifications

Information


Unique identifier OMICS_23777
Name microRNA Prediction Model
Interface Web user interface
Restrictions to use None
Input data Some small RNA sequencing reads.
Input format FASTA, FASTQ, TXT
Programming languages Perl
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Wen-Chi Chang <>

Additional information


http://microrpm.itps.ncku.edu.tw/tutorial.php

Information


Unique identifier OMICS_23777
Name microRNA Prediction Model
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data Some small RNA sequencing reads.
Input format FASTA, FASTQ, TXT
Operating system Unix/Linux, Mac OS
Programming languages Perl
Computer skills Advanced
Stability Stable
Requirements Bowtie, Vienna, Trinity, LibSVM, libsvm.patch
Maintained Yes

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Maintainer


  • person_outline Wen-Chi Chang <>

Additional information


http://microrpm.itps.ncku.edu.tw/tutorial.php

microRPM article

microRPM institution(s)
College of Biosciences and Biotechnology, Institute of Tropical Plant Sciences, National Cheng Kung University, Tainan, Taiwan; Institute of Plant and Microbial Biology, Academia Sinica, NanKang Taipei, Taiwan
microRPM funding source(s)
Supported by the Ministry of Science and Technology and Academia Sinica in Taiwan.

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