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microRNA target prediction miTarget

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Predicts miRNA target gene. miTarget is a support vector machine (SVM) that uses a radial basis function kernel as a similarity measure for SVM features, categorized by structural, thermodynamic, and position-based features. It produces high performance with a biologically relevant data set obtained from the literature, compared with previous tools. Its predictions are meaningful by Gene Ontology (GO) analysis and its performance can be improved given more training examples.

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miTarget classification

miTarget specifications

Interface:
Web user interface
Input data:
A single linear RNA sequence.
Stability:
Stable
Restrictions to use:
None
Computer skills:
Basic
Maintained:
Yes

miTarget support

Maintainer

  • Byoung-Tak Zhang <>

Credits

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Publications

Funding source(s)

This work was supported by the National Research Laboratory program (M10412000095-04J0000-03610) of the Korean Ministry of Science and Technology and by a Seoul Science Fellowship from Seoul City.

Link to literature

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.