MANTIS specifications

Unique identifier:
OMICS_20470
Software type:
Application/Script
Restrictions to use:
None
Operating system:
Unix/Linux
License:
GNU General Public License version 3.0
Stability:
Stable
Maintained:
Yes
Name:
Microsatellite Analysis for Normal Tumor InStability
Interface:
Command line interface
Input format:
6-column BED format
Programming languages:
Python
Computer skills:
Advanced
Requirements:
NumPy, Pysam

Subtools

  • Repeat Finder

versioning

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MANTIS distribution

download

MANTIS support

Documentation

Maintainer

  • Sameek Roychowdhury <>

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Publications

Institution(s)

Comprehensive Cancer Center, The Ohio State University, Columbus, OH, USA; Department of Biomedical Informatics, The Ohio State University, Columbus, OH, USA; Division of Medical Oncology, Department of Internal Medicine, The Ohio State University, Columbus, OH, USA

Funding source(s)

Supported by American Cancer Society [grant number MRSG-12-194-01-TBG]; the Prostate Cancer Foundation; the National Human Genome Research Institute [grant number UM1HG006508]; the National Cancer Institute [grant number UH2CA202971]; the American Lung Association; Pelotonia; and Fore Cancer Research.

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