MicroSCoBioJ statistics

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MicroSCoBioJ specifications

Information


Unique identifier OMICS_25921
Name MicroSCoBioJ
Alternative names Mesh Maker MicroSCoBioJ, Mesh Viewer MicroSCoBioJ, WAT MicroSCoBioJ Weight Adaptive Threshold
Software type Toolkit/Suite
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
Computer skills Medium
Stability Stable
Requirements
ImageJ
Source code URL http://imagejdocu.tudor.lu/lib/exe/fetch.php?media=plugin:stacks:microscobioj:microscobioj.zip
Maintained Yes

Versioning


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Maintainers


  • person_outline Fabio Frosi <>
  • person_outline Giuseppe Vicidomini <>

MicroSCoBioJ in pipeline

2008
PMCID: 2635477
PMID: 18817522
DOI: 10.1111/j.1600-0854.2008.00815.x

[…] multichannel flm image and grayscale tem image was performed using image5d plug-in. 3d fluorescence volume rendering was obtained combining two plug-ins developed in our laboratory: ‘mesh maker microscobioj’ implemented the marching cube () algorithm to extract isosurfaces from the 3d fluorescence volume data (see surface rendering in ) and ‘mesh viewer microscobioj’ used […]


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MicroSCoBioJ in publication

PMCID: 2635477
PMID: 18817522
DOI: 10.1111/j.1600-0854.2008.00815.x

[…] bidimensional multichannel images. registration () and rendering software were based on imagej() plug-ins, either modified or originally developed, and collected together in a software package named microscobioj., registration was performed between consecutive pair of images (a reference image and a source image). we set the roi identified on the first section as reference image () […]


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