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microsoap specifications


Unique identifier OMICS_14694
Name microsoap
Alternative name Microarray Gene Expression Markup Language
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
Computer skills Advanced
Stability No
Maintained Yes


No version available


  • person_outline Donny Tjandra

Publication for Microarray Gene Expression Markup Language

microsoap citations


MicroDAIMON study: Microcirculatory DAIly MONitoring in critically ill patients: a prospective observational study

PMCID: 5953911
PMID: 29766322
DOI: 10.1186/s13613-018-0411-9

[…] de, in a non-invasive way []. However, until 2015, data on microcirculatory alterations in the Intensive Care Unit (ICU) were restricted to small sample-sized studies in high-risk patients [, , ].The MicroSOAP study by Vellinga and colleagues [] gave a first insight in the prevalence of microcirculatory alterations in a large number of ICU patients. However, due to its design with a single time-po […]


Mildly elevated lactate levels are associated with microcirculatory flow abnormalities and increased mortality: a microSOAP post hoc analysis

PMCID: 5646128
PMID: 29047411
DOI: 10.1186/s13054-017-1842-7
call_split See protocol

[…] e observational point prevalence study of the prevalence and significance of microcirculatory alterations in a heterogeneous ICU population (Microcirculatory Shock Occurrence in Acutely ill Patients [microSOAP; ClinicalTrials.gov identifier NCT01179243; registered on August 3, 2010 []). Thirty-six ICUs worldwide participated in this study. Being a point prevalence study, data collection on patient […]


Clinical review: Clinical imaging of the sublingual microcirculation in the critically ill where do we stand?

PMCID: 3580600
PMID: 22713365
DOI: 10.1186/cc11236

[…] and patient characteristics were recorded at a single time point in many intensive care units throughout the world (for example, [-]) but focused on the sublingual microcirculation, it was named the microSOAP study (Microcirculatory Shock Occurrence in Acutely ill Patients registered at ClinicalTrials.gov: NCT01179243). In the microSOAP study, the prevalence of microcirculatory alterations in int […]


Study Design of the Microcirculatory Shock Occurrence in Acutely Ill Patients (microSOAP): an International Multicenter Observational Study of Sublingual Microcirculatory Alterations in Intensive Care Patients

PMCID: 3359769
PMID: 22666566
DOI: 10.1155/2012/121752

[…] hat way, we will be able to look for the part of the clip that is most suitable for analysis. The software on the USB stick automatically establishes an Internet connection with the central dedicated microSOAP study server using the required communication protocol and security settings. Backup copies of the clips are automatically stored on the USB stick. In case of failure of Internet connection, […]


Navajo Coal Combustion and Respiratory Health Near Shiprock, New Mexico

PMCID: 2910467
PMID: 20671946
DOI: 10.1155/2010/260525

[…] us. Filters were stored in 50 mm diameter polystyrene Petri dishes with lids that were acid-cleaned prior to use. In the first step of the cleaning procedure, tops and bottoms were placed in a dilute microsoap bath for fifteen minutes and rinsed with 18.2 mega-ohm/cm Milli-Q water. After being covered and dried overnight or dried in filtered air, the Petri dishes were placed in a 10% trace metal g […]


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microsoap institution(s)
UCSF Department of Radiology, San Francisco, CA, USA; Harvard Center for Neurodegeneration and Repair (HCNR), Harvard Medical School, Boston, MA, USA; Department of Radiology, Brigham & Women Hospital, Harvard Medical School, Boston, MA, USA; Department of Biochemistry and Biophysics, University of California, San Francisco, CA, USA; Carol Franc Buck Breast Care Center, University of California, San Francisco, CA, USA; Department of Surgery, School of Medicine, University of California, San Francisco, CA, USA

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