MIGenAS integrated bioinformatics toolkit statistics

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chevron_left Multiple nucleotide sequence alignment Phylogenetic inference Nucleotide sequence homology search Bioinformatics workflows chevron_right
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MIGenAS integrated bioinformatics toolkit specifications

Information


Unique identifier OMICS_24753
Name MIGenAS integrated bioinformatics toolkit
Alternative name MIGenAS
Software type Toolkit/Suite
Interface Web user interface
Restrictions to use None
Computer skills Basic
Maintained No

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Publication for MIGenAS integrated bioinformatics toolkit

MIGenAS integrated bioinformatics toolkit in publications

 (2)
PMCID: 3187862
PMID: 20849449
DOI: 10.1111/j.1462-2920.2010.02336.x

[…] gblocks polishing] and phylogenetic analysis [e.g. employing phyml (), phylip ()] yielded qualitatively very similar results. the complete analysis pipelines were conducted with the help of the migenas toolkit ()., the mathematical modelling was carried out as outlined in ‘network reconstruction and flux balance analysis’ and further detailed in supporting information. all simulations […]

PMCID: 2837032
PMID: 20163733
DOI: 10.1186/1471-2164-11-115

[…] statistical significance between the two hit counts for each contig species was then assessed []., similarity searches against protein databases were performed using blastx implemented in the migenas tool [] (e-value 1 × 10-3). we utilized nine protein databases in this comparison: swiss-prot and trembl (versions 56.3 and 39.3) [], dictybase [] and refseq database subsets: mammalian, […]

MIGenAS integrated bioinformatics toolkit institution(s)
Rechenzentrum Garching der Max-Planck-Gesellschaft (RZG), am Max-Planck-Institut fur Plasmaphysik, Garching, Germany

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