MIGenAS integrated bioinformatics toolkit statistics

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Citations per year

Number of citations per year for the bioinformatics software tool MIGenAS integrated bioinformatics toolkit

Tool usage distribution map

This map represents all the scientific publications referring to MIGenAS integrated bioinformatics toolkit per scientific context
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Associated diseases


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chevron_left Bioinformatics workflows Multiple nucleotide sequence alignment Phylogenetic inference Nucleotide sequence homology search chevron_right
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MIGenAS integrated bioinformatics toolkit specifications


Unique identifier OMICS_24753
Name MIGenAS integrated bioinformatics toolkit
Alternative name MIGenAS
Software type Toolkit/Suite
Interface Web user interface
Restrictions to use None
Computer skills Basic
Maintained No


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Publication for MIGenAS integrated bioinformatics toolkit

MIGenAS integrated bioinformatics toolkit citations


A blueprint of ectoine metabolism from the genome of the industrial producer Halomonas elongata DSM 2581T

Environ Microbiol
PMCID: 3187862
PMID: 20849449
DOI: 10.1111/j.1462-2920.2010.02336.x

[…] thout GBlocks polishing] and phylogenetic analysis [e.g. employing PhyML (), PHYLIP ()] yielded qualitatively very similar results. The complete analysis pipelines were conducted with the help of the MIGenAS toolkit (). […]


Transcriptomic changes arising during light induced sporulation in Physarum polycephalum

BMC Genomics
PMCID: 2837032
PMID: 20163733
DOI: 10.1186/1471-2164-11-115
call_split See protocol

[…] Similarity searches against protein databases were performed using BLASTX implemented in the MIGenAS tool [] (e-value 1 × 10-3). We utilized nine protein databases in this comparison: Swiss-Prot and TrEMBL (versions 56.3 and 39.3) [], dictyBase [] and RefSeq database subsets: mammalian, other […]


Bioinformatics process management: information flow via a computational journal

Source Code Biol Med
PMCID: 2228283
PMID: 18053179
DOI: 10.1186/1751-0473-2-9

[…] odified to facilitate cluster computing.) The basic functionality of PISE is designed to execute programs sequentially. However, there is a plug-in called G-Pipe, which allows pipelines to be defined.MIGenAS [], the Max-Planck Integrated Gene Analysis System, is similar to PISE in that it offers a web page providing the ability to graphically enter program parameters and execute linear pipelines. […]


The genome of the square archaeon Haloquadratum walsbyi : life at the limits of water activity

BMC Genomics
PMCID: 1544339
PMID: 16820047
DOI: 10.1186/1471-2164-7-169

[…] and other RNAs were predicted using tRNAscan [] and BLAST [] against other halophiles, respectively. Phylogenetic analysis of proteins was performed using the Microbial Genome Analysis System package MiGenAS [,] and the MEGA3 phylogenetic tool software package [,]. […]

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MIGenAS integrated bioinformatics toolkit institution(s)
Rechenzentrum Garching der Max-Planck-Gesellschaft (RZG), am Max-Planck-Institut fur Plasmaphysik, Garching, Germany

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