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MiMiR specifications

Information


Unique identifier OMICS_26925
Name MiMiR
Alternative name Microarray data Mining Resource
Interface Web user interface
Restrictions to use None
Computer skills Basic
Maintained No

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Publication for Microarray data Mining Resource

MiMiR citations

 (4)
library_books

Comprehensive literature review and statistical considerations for microarray meta analysis

2012
Nucleic Acids Res
PMCID: 3351145
PMID: 22262733
DOI: 10.1093/nar/gkr1265

[…] () are two secondary databases that accompany GEO and ArrayExpress. Other secondary databases include Genevestigator (), ArrayTrack (), Gemma, NextBio (), LOLA (), L2L (), A-MADMAN (), PrognoScan (), MiMiR (), Microarray retriever (), TranscriptomeBrowser (), M2DB (), MAMA () and GeneSigDB (). These tools contain various types of gene signature, regulatory network and differential expression infor […]

library_books

eXframe: reusable framework for storage, analysis and visualization of genomics experiments

2011
BMC Bioinformatics
PMCID: 3235155
PMID: 22103807
DOI: 10.1186/1471-2105-12-452

[…] he raw data from next generation sequencing runs []. However most genomics repositories are still limited to microarrays - examples include the Stanford Microarray Database [], mAdb [], Genopolis [], MiMiR [] and several others which are compared in a useful review by Gardiner-Garden and Littlejohn [].Most of these microarray databases follow the Minimum Information About a Microarray Experiment ( […]

library_books

Exploring the use of internal and externalcontrols for assessing microarray technical performance

2010
BMC Res Notes
PMCID: 3020182
PMID: 21189145
DOI: 10.1186/1756-0500-3-349

[…] cRNA: copy RNA; CSC/IC: Clinical Sciences Centre/Imperial College; ERCC: External RNA Controls Consortium; MAQC: MicroArray Quality Control; MiMiR: Microarray data Mining Resource; NUSE: Normalized Unscaled Standard Error; PCA: Principal Component Analysis; polyA+: polyadenylated; QA/QC: Quality Assurance/Quality Control; RawQ: Noise attri […]

library_books

MiMiR: a comprehensive solution for storage, annotation and exchange of microarray data

2005
BMC Bioinformatics
PMCID: 1299320
PMID: 16280078
DOI: 10.1186/1471-2105-6-268

[…] MiMiR provides a comprehensive data management environment and was built to support work at a busy academic microarray centre. A problem-based approach to design led to the creation of a purely relati […]

Citations

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MiMiR institution(s)
Microarray Centre, MRC Clinical Sciences Centre and Imperial College, Hammersmith Hospital, London, UK; Physiological Genomics and Medicine Group, MRC Clinical Sciences Centre, Faculty of Medicine, Imperial College, Hammersmith Hospital, London, UK; Health Dialog, Wellington House, Cambridge, UK; NCRI Informatics Initiative, London, UK; Centre for Integrated Systems Biology at Imperial College, Imperial College, South Kensington Campus, London, UK; Bioinformatics Support Service, Imperial College, South Kensington Campus, London, UK; Imperial College, Hammersmith Hospital, London, UK
MiMiR funding source(s)
Supported by the Medical Research Council, the Department of Health (NEAT), the BBSRC (BEP), and the European Union (EURATools).

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