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Number of citations per year for the bioinformatics software tool MINGLeD

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This map represents all the scientific publications referring to MINGLeD per scientific context
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MINGLeD specifications


Unique identifier OMICS_30007
Alternative name Model INtegrating Glucose and Lipid Dynamics
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C, C++, MATLAB
Computer skills Advanced
Stability Stable
Maintained Yes




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  • person_outline Yvonne Rozendaal

Publication for Model INtegrating Glucose and Lipid Dynamics

MINGLeD citations


New World feline APOBEC3 potently controls inter genus lentiviral transmission

PMCID: 5894237
PMID: 29636069
DOI: 10.1186/s12977-018-0414-5

[…] if and host A3Z3, first we constructed a phylogenetic tree of FIV vif gene. As shown in Fig. a, FIVfca and FIVple formed clusters based on their hosts. In sharp contrast, the FIVlru sequences were co-mingled with some FIVpco sequences, whereas the other FIVpco sequences formed a cluster (Fig. a). These results are consistent with the phylogeny of the full-length FIV sequences shown in a previous s […]


The anterior ventrolateral temporal lobe contributes to boosting visual working memory capacity for items carrying semantic information

PMCID: 5864511
PMID: 29289617
DOI: 10.1016/j.neuroimage.2017.12.085

[…] t 1, except the following modifications: instead of presenting trials of different encoding duration in separate blocks like our Experiment 1 and , here the trials of 0.25-sec and 2-sec were randomly mingled within a block of 80 trials while the three types of stimuli were shown in separate blocks. In each TMS session, participants completed three blocks of 80 trials, giving 40 trials in each cond […]


Three new species of Talaromyces sect. Talaromyces discovered from soil in China

Sci Rep
PMCID: 5862941
PMID: 29563618
DOI: 10.1038/s41598-018-23370-x

[…] olonies 26–27 mm diam on CYA at 25 °C after 7 d, thin, with few radial sulci; velutinous with sparsely overlaid mycelium; conidiogenesis absent, mycelium near Pale Salmon Color (R. Pl. XIV), slightly mingled with Naphthalene Yellow (R. Pl. XVI); exudate absent or limited, clear; no soluble pigment; reverse Cinnamon (R. Pl. XXIX). Colonies 43–44 mm diam on MEA at 25 °C after 7 d, moderately deep, p […]


A screen for deeply conserved non coding GWAS SNPs uncovers a MIR 9 2 functional mutation associated to retinal vasculature defects in human

Nucleic Acids Res
PMCID: 5909433
PMID: 29518216
DOI: 10.1093/nar/gky166

[…] ge, due to our incomplete understanding of regulatory codes. Moreover, the genes they regulate, which could give us clues to their function, can be located tens or hundreds of kilobase-pairs away and mingled among other genes, making the discovery of the actual cis-regulated gene a tremendous challenge. To date, very few intronic or inter-genic GWAS-SNPs have been functionally validated in vivo as […]


Unsupervised Learning and Pattern Recognition of Biological Data Structures with Density Functional Theory and Machine Learning

Sci Rep
PMCID: 5765025
PMID: 29323205
DOI: 10.1038/s41598-017-18931-5

[…] it the different clusters in the corresponding channels.It is found that the basic red channel was mixed with the other combinatorial channels so that their corresponding neural morphologies would be mingled severely. Thus, the red-channel-based neural morphology would not be definitely presented unless the auxiliary channels could be first inhibited. As shown in Fig. , a threshold value of −9dB-F […]


A taxonomic revision of the subfamily Tillinae Leach sensu lato (Coleoptera, Cleridae) in the New World

PMCID: 5740450
PMID: 29290697
DOI: 10.3897/zookeys.179.21253

[…] laterally compressed; clothed with some pale, fine, semi erect setae; surface feebly, shallowly punctate. Tibiae rugulose, slender, puncticulate; vestiture consisting of fine, pale, semi-erect setae mingled with some pale, semirecumbent setae.Abdomen: Six visible ventrites. Ventrites 1-4 convex, smooth, shiny. First visible ventrite longer than second visible ventrite, feebly rugulose; ventrites […]

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MINGLeD institution(s)
Department of Biomedical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands; Department of Pediatrics, Section Molecular Genetics, University Medical Center Groningen, University of Groningen, Groningen, The Netherlands; Department of Medicine, Division of Endocrinology, Leiden University Medical Center, Leiden, The Netherlands; Einthoven Laboratory for Experimental Vascular Medicine, Leiden University Medical Center, Leiden, The Netherlands; Department of Human Genetics, Leiden University Medical Center, Leiden, The Netherlands; Amsterdam Diabetes Center, Department of Vascular Medicine, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands
MINGLeD funding source(s)
Supported by the European Union’s Research and Innovation programme; grant FP7-HEALTH-305707: “A systems biology approach to RESOLVE the molecular pathology of two hallmarks of patients with metabolic syndrome and its co-morbidities; hypertriglyceridemia and low HDL-cholesterol” and a VENI grant from NWOZonMW (91617027).

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