Online

Provides unique, perennial and location-independent identifiers for data used in the biomedical domain. MIRIAM provides both an identifier scheme and resolution system. It enables users to (i) have confidence that curated models are an accurate reflection of their associated reference descriptions, (ii) search collections of curated models with precision, (iii) quickly identify the biological phenomena that a given curated model or model constituent represents and (iv) facilitate model reuse and composition into large subcellular models. MIRIAM will enable the peer review process to become more efficient and its products more accessible.

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MIRIAM classification

MIRIAM specifications

Restrictions to use:
None
Database management system:
MySQL
Data access:
File download, Web user interface
Programming languages:
Java
Community driven:
No
User data submission:
Not allowed

Credits

Publications

  • (Juty et al., 2012) Identifiers.org and MIRIAM Registry: community resources to provide persistent identification. Nucleic Acids Research.
    PMID: 22140103
  • (Laibe and Le Novere, 2007) MIRIAM Resources: tools to generate and resolve robust cross-references in Systems Biology. BMC Syst Biol.
    PMID: 18078503
  • (Le Novere et al., 2005) Minimum information requested in the annotation of biochemical models (MIRIAM). Nat Biotechnol.
    PMID: 16333295

Institution(s)

European Bioinformatics Institute, Hinxton, Cambridge, UK

Funding source(s)

Supported by EMBL, ELIXIR and BBSRC (grants BB/E005748/1 and JPA 1729).

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