tutorial arrow
×
Create your own tool library
Bookmark tools and put favorites into folders to find them easily.

Minimum Spanning Trees Inferred Clustering MiSTIC

Visualizes and compares collections of gene expression profiles, instantly highlighting differences and similarities in gene clustering between cancer types or subtypes. MiSTIC should facilitate identification of new prognostic markers and accelerate improvements in the molecular classification of cancers. Its integrative concept greatly improves the accessibility of complex datasets by end-users and enables the generation of hypotheses on mechanisms driving correlated gene expression. It is adaptable to the analysis of any collection of quantitative profiles.

User report

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible

0 user reviews

0 user reviews

No review has been posted.

MiSTIC forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.

No open topic.

MiSTIC classification

MiSTIC specifications

Interface:
Web user interface
Input data:
A dataset, a gene.
Computer skills:
Basic
Maintained:
Yes
Restrictions to use:
None
Input format:
ENTREZ GENE, SYMBOL
Stability:
Stable

User report

tutorial arrow
×
Vote up tools and offer feedback
Give value to tools and make your expertise visible

0 user reviews

0 user reviews

No review has been posted.

MiSTIC forum

tutorial arrow
×
Communicate with other users
Participate in the forum to get support for using tools. Ask questions about technical specifications.

No open topic.

MiSTIC versioning

tutorial arrow
×
Upload and version your source code
Get a DOI for each update to improve tool traceability. Archive your releases so the community can easily visualize progress on your work.

No versioning.

MiSTIC classification

MiSTIC specifications

Software type:
Package/Module
Restrictions to use:
None
Computer skills:
Advanced
Maintained:
Yes
Interface:
Command line interface
Operating system:
Unix/Linux
Stability:
Stable
Source code URL:
https://github.com/iric-soft/MiSTIC

MiSTIC support

Maintainer

  • Guy Sauvageau <>
  • Guy Sauvageau <>

Credits

tutorial arrow
×
Promote your skills
Define all the tasks you managed and assign your profile the appropriate badges. Become an active member.

Publications

Institution(s)

The Leucegene project, Université de Montréal, Montréal, Canada; Institute for Research in Immunology and Cancer (IRIC), Université de Montréal, Montréal, Canada; Computer science and operation research, Universite de Montréal, Montréal, Canada; Division of Molecular Medicine, The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia; Division of Hematology, Maisonneuve-Rosemont Hospital, Montréal, Canada; Leukemia Cell Bank of Quebec, Maisonneuve-Rosemont Hospital, Montréal, Canada; Department of Medicine, Faculty of Medicine, Universite de Montréal, Montréal, Canada; Department of Biochemistry, Université de Montréal, Montréal, Canada; Centre de Recherche du Centre Hospitalier Universitaire de l’Université de Montréal, Montréal, Canada

Funding source(s)

Supported by Genome Quebec; Terry Fox Foundation; Canada Research Chair in the Molecular Genetics of Stem Cells; Cancer Research Network of the Fonds de Recherche du Quebec-Santé; Australian Government National Health and Medical Research Council [Independent Research Institute Infrastructure Support Scheme; program grant 1016647]; Canadian Cancer Society Research Institute [703961]; Canadian Imperial Bank of Commerce breast cancer research chair at Université de Montréal.

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.