MiniScrub specifications


Unique identifier OMICS_32236
Name MiniScrub
Software type Application/Script
Interface Command line interface
Restrictions to use None
Biological technology Oxford Nanopore
Operating system Unix/Linux
Programming languages Python
License BSD 3-clause “New” or “Revised” License
Computer skills Advanced
Stability Stable
Maintained Yes




No version available


  • person_outline Zhong Wang

Publication for MiniScrub

MiniScrub institution(s)
Department of Computer Science, University of California at Los Angeles, Los Angeles CA, USA; Department of Energy Joint Genome Institute, Walnut Creek, CA, USA; EGSB Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA; School of Natural Sciences, University of California at Merced, Merced CA, USA
MiniScrub funding source(s)
Supported by NERSC, the NSF, the NIH, the U.S. Department of Energy under Contract No. DE-AC02- 05CH11231, and NSF grant DGE-1829071 and NIH grants 5T32EB016640-05 and 4T32EB016640-04.

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