MinorityReport statistics

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MinorityReport specifications

Information


Unique identifier OMICS_14697
Name MinorityReport
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Reference sequence, gene annotation file, parent strain, child/mutant strain.
Input format FASTA, GFF, SAM
Output data All variants over n% abundant in reads mapped to this position, unique in child w.r.t. parent or statistics of read ratios for each tile.
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

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  • person_outline Jeremy Horst <>

Publication for MinorityReport

MinorityReport in publication

PMCID: 5439709
PMID: 28542423
DOI: 10.1371/journal.pone.0178163

[…] rna ribonucleoprotein complex and a 200-nucleotide single-stranded oligodeoxynucleotide (ssodn) repair template. analysis of whole genome sequencing data with the variant-finding program minorityreport confirmed that only the intended edits were made, and growth inhibition assays confirmed that these mutations confer resistance to the antimalarial sj733. the method described […]


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MinorityReport institution(s)
Department of Biochemistry and Biophysics, University of California San Francisco School of Medicine, CA, USA; Howard Hughes Medical Institute, MD, USA
MinorityReport funding source(s)
Supported by NIH/NIDCR training grant T32-DE007306, by the Philippine California Advanced Research Institutes project IHITM 63 and by the Howard Hughes Medical Institute.

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